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View Structure Prediction Details

Protein: gi|25335886, gi|...
Organism: Arabidopsis thaliana
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25335886, gi|....

Description E-value Query
Range
Subject
Range
SSL12_ARATH - Protein STRICTOSIDINE SYNTHASE-LIKE 12 OS=Arabidopsis thaliana GN=SSL12 PE=2 SV=2
205.0 [0..18] [325..19]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFVFVISL LLLSFSSAVF SDDASFQKLP VPDKRSGPES FAFDSTGGFY TGVSGGKILK  60
   61 YVPGKGYVDF AQITDSSNSA WCNGALGTAF AGKCGRPAGI ALNSKTGDLY VADAPLGLHV 120
  121 ISPAGGLATK LADSVDGKPF KFLDGLDVDP TTGVVYFTSF SSKFGPREVL IAVGLKDASG 180
  181 KLFKYDPATK AVTELMEGLS GAAGCAVSSD GSFVLVSEFI KSNIKKYWIK GPKAGTIEDF 240
  241 SSLVSNPDNI RRVGSTGNFW VASVVNKVVM PTDPRAVKLD ANGKVLQTIF LKNEFGNTLL 300
  301 SEVNEFNGHL YIGTLTGPFA GVMKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.09691
Match: 2fpbA
Description: No description for 2fpbA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle