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View Structure Prediction Details

Protein: FATB_ARATH
Organism: Arabidopsis thaliana
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FATB_ARATH.

Description E-value Query
Range
Subject
Range
gi|81362039 - gi|81362039|gb|ABB71581.1| acyl-acyl carrier protein thioesterase [Cuphea calophylla subsp. mesostem...
433.0 [0..1] [410..1]
FATB_CUPHO - Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1
430.0 [0..1] [403..1]
gi|495227 - gi|495227|emb|CAA54060.1| acyl-ACP thioesterase [Cuphea lanceolata]
422.0 [0..1] [410..1]
gi|804948 - gi|804948|emb|CAA85388.1| acyl-(acyl carrier protein) thioesterase [Arabidopsis thaliana]
405.0 [0..1] [399..1]
gi|112455672 - gi|112455672|gb|ABI18986.1| palmitoyl-ACP thioesterase [Brassica juncea]
404.0 [0..1] [412..1]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVATSATSSF FPVPSSSLDP NGKGNKIGST NLAGLNSAPN SGRMKVKPNA QAPPKINGKK  60
   61 VGLPGSVDIV RTDTETSSHP APRTFINQLP DWSMLLAAIT TIFLAAEKQW MMLDWKPRRS 120
  121 DMLVDPFGI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [130-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRIVQDGLVF RQNFSIRSYE IGADRSASIE TVMNHLQETA LNHVKTAGLL GDGFGSTPEM  60
   61 FKKNLIWVVT RMQVVVDKYP TWGDVVEVDT WVSQSGKNGM RRDWLVRDCN TGETLTRASS 120
  121 VWVMMNKLTR RLSKIPEEVR GEIEPYFVNS DPVLAEDSRK LTKIDDKTAD YVRSGLTPRW 180
  181 SDLDVNQHVN NVKYIGWILE SAPVGIMERQ KLKSMTLEYR RECGRDSVLQ SLTAVTGCDI 240
  241 GNLATAGDVE CQHLLRLQDG AEVVRGRTEW SSKTPTTTWG TAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.39794
Match: 2ownA
Description: No description for 2ownA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle