| Protein: | PME34_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 598 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME34_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
589.0 | [0..1] | [597..1] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MGYERLGPSG ATGSVTTSTT TAPILNQVST SEQPENNNRR SKKKLVVSSI VLAISLILAA 60
61 AIFAGVRSRL KLNQSV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [77-243] |
1 11 21 31 41 51
| | | | | |
1 PGLARKPSQA ISKACELTRF PELCVDSLMD FPGSLAASSS KDLIHVTVNM TLHHFSHALY 60
61 SSASLSFVDM PPRARSAYDS CVELLDDSVD ALSRALSSVV SSSAKPQDVT TWLSAALTNH 120
121 DTCTEGFDGV DDGGVKDHMT AALQNLSELV SNCLAIFSAS HDGDDFA
|
| Detection Method: | |
| Confidence: | 23.39794 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [244-598] |
1 11 21 31 41 51
| | | | | |
1 GVPIQNRRLL GVEEREEKFP RWMRPKEREI LEMPVSQIQA DIIVSKDGNG TCKTISEAIK 60
61 KAPQNSTRRI IIYVKAGRYE ENNLKVGRKK INLMFVGDGK GKTVISGGKS IFDNITTFHT 120
121 ASFAATGAGF IARDITFENW AGPAKHQAVA LRIGADHAVI YRCNIIGYQD TLYVHSNRQF 180
181 FRECDIYGTV DFIFGNAAVV LQNCSIYARK PMDFQKNTIT AQNRKDPNQN TGISIHASRV 240
241 LAASDLQATN GSTQTYLGRP WKLFSRTVYM MSYIGGHVHT RGWLEWNTTF ALDTLYYGEY 300
301 LNSGPGSGLG QRVSWPGYRV INSTAEANRF TVAEFIYGSS WLPSTGVSFL AGLSI
|
| Detection Method: | |
| Confidence: | 107.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
