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View Structure Prediction Details

Protein: MOT2_ARATH
Organism: Arabidopsis thaliana
Length: 464 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MOT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|53830059 - gi|53830059|gb|AAU94938.1| anchor protein [Homo sapiens]
287.0 [0..5] [463..3465]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTTTPLLP GDRSRCGWLR RRLRLKNPLS SELSGAVGDL GTFIPIVLTL TLVSNLDLST  60
   61 TLIFTGFYNI ATGLLFDIPM PVQPMKSIAA VAVSESPHLT PSQIAAAGAS TAATLLLLGA 120
  121 TGAMSFLYNI IPLPVVRGVQ LSQGLQFAFT AIKYVR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [157-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNYDTATLKP SSSPRIWLGL DGLILALAAL LFIILSTGSG NDREAEDGDL AETSSNESQS  60
   61 RRRRLRLLSS IPSALIVFAL GLVLCFIRDP SI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [249-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKDLKFGPSK FHILRISWDD WKIGFLRAAI PQIPLSVLNS VIAVCKLSND LFDKELSATT  60
   61 VSISVGVMNL IGCWFGAMPV CHGAGGLAGQ YRFGARSGLS VIFLGIGKLI VGLVFGNSFV 120
  121 RILSQFPIGI LGVLLLFAGI ELAMASKDMN SKEDSFIMLV CAAVSMTGSS AALGFGCGVV 180
  181 LYLLLKLRTL DCSSVTLFSR SSDESQVDSE AAPRDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle