| Protein: | PAPS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 713 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAPS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
705.0 | [0..1] | [703..9] |
|
Region A: Residues: [1-506] |
1 11 21 31 41 51
| | | | | |
1 MASVQQNGQR FGVSEPISMG GPTEFDVIKT RELEKHLQDV GLYESKEEAV RREEVLGILD 60
61 QIVKTWIKTI SRAKGLNDQL LHEANAKIFT FGSYRLGVHG PGADIDTLCV GPRHATREGD 120
121 FFGELQRMLS EMPEVTELHP VPDAHVPLMG FKLNGVSIDL LYAQLPLWVI PEDLDLSQDS 180
181 ILQNADEQTV RSLNGCRVTD QILRLVPNIQ NFRTTLRCMR FWAKRRGVYS NVSGFLGGIN 240
241 WALLVARICQ LYPNALPNIL VSRFFRVFYQ WNWPNAIFLC SPDEGSLGLQ VWDPRINPKD 300
301 RLHIMPIITP AYPCMNSSYN VSESTLRIMK GEFQRGNEIC EAMESNKADW DTLFEPFAFF 360
361 EAYKNYLQID ISAANVDDLR KWKGWVESRL RQLTLKIERH FKMLHCHPHP HDFQDTSRPL 420
421 HCSYFMGLQR KQGVPAAEGE QFDIRRTVEE FKHTVNAYTL WIPGMEISVG HIKRRSLPNF 480
481 VFPGGVRPSH TSKGTWDSNR RSEHRN
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1f5aA |
| Description: | Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.122769147009 | bayes_pls_golite062009 |
| RNA binding | 1.07207584601969 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.92178707322923 | bayes_pls_golite062009 |
| polynucleotide adenylyltransferase activity | 0.911825870004661 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.667889614569279 | bayes_pls_golite062009 |
| transferase activity | 0.63270331673446 | bayes_pls_golite062009 |
|
Region A: Residues: [507-581] |
1 11 21 31 41 51
| | | | | |
1 SSTSSAPAAT TTTTEMSSES KAGSNSPVDG KKRKWGDSET LTDQPRNSKH IAVSVPVENC 60
61 EGGSPNPSVG SICSS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [582-713] |
1 11 21 31 41 51
| | | | | |
1 PMKDYCTNGK SEPISKDPPE NVVAFSKDPP ESLPIEKIAT PQAHETEELE ESFDFGNQVI 60
61 EQISHKVAVL SATATIPPFE ATSNGSPFPY EAVEELEVLP TRQPDAAHRP SVQQRKPIIK 120
121 LSFTSLGKTN GK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
