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View Structure Prediction Details

Protein: BLH1_ARATH
Organism: Arabidopsis thaliana
Length: 680 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BLH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|13877517 - gi|13877517|gb|AAK43836.1|AF353094_1 BEL1-like homeodomain 1 [Arabidopsis thaliana]
368.0 [0..1] [680..1]
gi|84453182 - gi|84453182|dbj|BAE71188.1| BEL1-like homeodomain transcription factor [Trifolium pratense]
279.0 [0..1] [680..1]
gi|34897010, gi|... - gi|34897010|ref|NP_909851.1| putative homeodomain protein [Oryza sativa (japonica cultivar-group)], ...
259.0 [0..1] [680..1]
gi|42528295 - gi|42528295|gb|AAS18416.1| benzothiadiazole-induced homeodomain protein 1; BTH-induced homeodomain p...
258.0 [0..1] [680..1]
gi|31323447 - gi|31323447|gb|AAP47025.1|AF375966_1 bell-like homeodomain protein 2 [Lycopersicon esculentum]
241.0 [0..4] [679..2]
gi|22652115 - gi|22652115|gb|AAN03621.1|AF406697_1 BEL1-related homeotic protein 5 [Solanum tuberosum]
240.0 [0..4] [679..2]
gi|55669507 - gb|AAV54621.1| homeobox transcription factor KN4 [Picea mariana]
gi|55669507 - gi|55669507|gb|AAV54621.1| homeobox transcription factor KN4 [Picea mariana]
235.0 [0..43] [470..9]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAYFHGNPP EISAGSDGGL QTLILMNPTT YVQYTQQDND SNNNNNSNNS NNNNTNTNTN  60
   61 NNNSSFVFLD SHAPQPNASQ QFVGIPLSGH EAASITAADN ISVLHGYPPR VQYSLYGSHQ 120
  121 VDPTHQQAAC ETPRAQQGLS LTLSSQQQQQ 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQHHQQHQPI HVGFGSGHGE DIRVGSGSTG SGVTNGIANL VSSKYLKAAQ ELLDEVVNAD  60
   61 SDDMNAKSQL FSSKKGSCGN DKPVGESSAG AGGEG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.420216
Match: PF07526.2
Description: No description for PF07526.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [246-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGGGAEAAGK RPVELGTAER QEIQMKKAKL SNMLHEVEQR YRQYHQQMQM VISSFEQAAG  60
   61 IGSAKSYTSL ALKTISRQFR CLKEAIAGQI KAANKSLGEE DSVSGVGRFE GSRLKFVDHH 120
  121 LRQQRALQQL GMIQHPSNNA WRPQRGLPER AVSVLRAWLF EHFLHPYPKD SDKHMLAKQT 180
  181 GLTRSQVSNW FINARVRLWK PMVEEMYMEE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.522879
Match: 2h8rA
Description: No description for 2h8rA was found.

Predicted Domain #4
Region A:
Residues: [456-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEQAKNMGS MEKTPLDQSN EDSASKSTSN QEKSPMADTN YHMNPNHNGD LEGVTGMQGS  60
   61 PKRLRTSDET 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [526-680]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQPINADFS SNEKLTMKIL EERQGIRSDG GYPFMGNFGQ YQMDEMSRFD VVSDQELMAQ  60
   61 RYSGNNNGVS LTLGLPHCDS LSSTHHQGFM QTHHGIPIGR RVKIGETEEY GPATINGGSS 120
  121 TTTAHSSAAA AAAYNGMNIQ NQKRYVAQLL PDFVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle