YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CK1_ARATH
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CK1_ARATH.

Description E-value Query
Range
Subject
Range
gi|1438883, gi|7... - pir||T08817 choline kinase (EC 2.7.1.32) CK3 - soybean (fragment), gi|1438883|gb|AAC49376.1| GmCK3p
258.0 [0..13] [344..120]

Back

Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKTKTSLI PSCSSPEDLK RVLQTLGSSW GDVVEDLERL EVVPLKGAMT NEVYQINWPT  60
   61 LNGEDVHRKV LVRIYGDGVD LFFNRGDEIK TFECMSHHGY GPKLLGRFSD GRLEEFIHAR 120
  121 TLSADDLRVA ETSDFIAAKL REFHKLDMPG PKNVLLWERL RTWLKEAKNL ASPIEMDKYR 180
  181 LEGLENEINL LEERLTRDDQ EIGFCHNDLQ YGNVMIDEVT NAITIIDYEY SSFNPIAYDI 240
  241 ANHFCEMAAN YHSDTPHVLD YTLYPGEGER RRFISTYLGS TGNATSDKEV ERLLKDAESY 300
  301 TLANHIFWGL WGIISGHVNK IEFDYMEYAR QRFEQYWLRK PLLLEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 2ig7A
Description: No description for 2ig7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle