YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MTP11_ARATH
Organism: Arabidopsis thaliana
Length: 394 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTP11_ARATH.

Description E-value Query
Range
Subject
Range
gi|28628306 - gi|28628306|gb|AAO38709.1| cation diffusion facilitator 10 [Stylosanthes hamata]
266.0 [0..15] [390..29]
gi|88179040, gi|... - gi|88179040|gb|EAQ86508.1| hypothetical protein CHGG_07761 [Chaetomium globosum CBS 148.51], gi|1161...
259.0 [0..4] [392..81]
MTP10_ARATH - Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1
256.0 [0..7] [392..37]
gi|125528310 - gi|125528310|gb|EAY76424.1| hypothetical protein OsI_04357 [Oryza sativa Indica Group]
MTP5_ORYSJ - Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1
253.0 [0..23] [393..40]
gi|83774755 - gi|83774755|dbj|BAE64878.1| unnamed protein product [Aspergillus oryzae]
gi|169783098 - gi|169783098|ref|XP_001826011.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|238492843, gi... - gi|238492843|ref|XP_002377658.1| cation diffusion facilitator 1 [Aspergillus flavus NRRL3357], gi|22...
248.0 [0..4] [389..62]

Back

Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEPASPDSD EGISLLEFHG NGDRSWQLNF DDFQVSPEHK EKKSPSKLHN CLGCLGPEDN  60
   61 VADYYQQQVE MLEGFTEMDE LAERGFV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [88-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGMSKEEQDN LAKSETLAIR ISNIANMLLF AAKVYASVTS GSLAIIASTL DSLLDLLSGF  60
   61 ILWFTAFSMQ TPNPYQYPIG KKRMQPLGIL VFASVMATLG LQIILESLRT MLSSHKEFNL 120
  121 TKEQESWVVG IMLSVTLVKL LLVLYCRSFT NEIVKAYAQD HFFDVITNII GLIAVILANY 180
  181 IDYWIDPVGA IILALYTIRT WSMTVLENVN SLVGKSARPE YLQKLTYLCW NHHKAIRHID 240
  241 TVRAYTFGSH YFVEVDIVLP ADMPLQVAHD IGESLQEKLE LLEEIERAFV HLDYEYTHKP 300
  301 EHARSHC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 2qfiA
Description: No description for 2qfiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle