YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30725426, gi|...
Organism: Arabidopsis thaliana
Length: 615 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30725426, gi|....

Description E-value Query
Range
Subject
Range
GLMM_ACTSZ - Phosphoglucosamine mutase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glmM PE=3 SV=...
409.0 [0..69] [544..2]

Back

Predicted Domain #1
Region A:
Residues: [1-615]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSTSSLM ASKTVISKTA LFSSLPGIVS RSFLTFAPAS PSVKPLRIRS SNVTKFDEVT  60
   61 NSLDEDMDQI RRLQNGSDVR GVALEGEKGR TVDLTPAAVE AIAESFGEWV AATESNGNGV 120
  121 IKISLGRDPR VSGGKLSTAV FAGLARAGCL AFDMGLATTP ACFMSTLLSP FEYDASIMMT 180
  181 ASHLPYTRNG LKFFTKRGGL TSPEVEKICD LAARKYATRQ TKVSTLIRTR PQQVDFMSAY 240
  241 SKHLREIIKE RINHPEHYDT PLKGFQIVVN AGNGSGGFFT WDVLDKLGAD TFGSLYLNPD 300
  301 GMFPNHIPNP ENKIAMQHTR AAVLENSADL GVVFDTDVDR SGVVDNKGNP INGDKLIALM 360
  361 SAIVLKEHPG STVVTDARTS MGLTRFITER GGRHCLYRVG YRNVIDKGVE LNKDGIETHL 420
  421 MMETSGHGAV KENHFLDDGA YMVVKIIIEM VRMRLAGSNE GIGSLIEDLE EPLEAVELRL 480
  481 NILSEPRDAK AKGIEAIETF RQYIEEGKLK GWELGTCGDC WVTEGCLVDS NDHPSAIDAH 540
  541 MYRARVSDEE SGEEYGWVHM RQSIHNPNIA LNMQSMLPGG CLSMTRIFRD QFLEASGVAR 600
  601 FLDISDFDNY IGGQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2h4lX
Description: No description for 2h4lX was found.

Predicted functions:

Term Confidence Notes
intramolecular transferase activity, phosphotransferases 1.39265790127077 bayes_pls_golite062009
catalytic activity 1.16308025600757 bayes_pls_golite062009
phosphomannomutase activity 1.12206356769537 bayes_pls_golite062009
isomerase activity 0.85386577585861 bayes_pls_golite062009
intramolecular transferase activity 0.33801004721634 bayes_pls_golite062009
phosphoacetylglucosamine mutase activity 0.304844260970429 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle