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View Structure Prediction Details

Protein: RGP1_ARATH
Organism: Arabidopsis thaliana
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RGP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|2317729 - gi|2317729|gb|AAC50000.1| reversibly glycosylated polypeptide-1 [Arabidopsis thaliana]
611.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA  60
   61 VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV SKKKYIFTID D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DCFVAKDPSG KAVNALEQHI KNLLCPSTPF FFNTLYDPYR EGADFVRGYP FSLREGVSTA  60
   61 VSHGLWLNIP DYDAPTQLVK PKERNTRYVD AVMTIPKGTL FPMCGMNLAF DRELIGPAMY 120
  121 FGLMGDGQPI GRYDDMWAGW CIKVICDHLG LGVKTGLPYI YHSKASNPFV NLKKEYKGIF 180
  181 WQEDIIPFFQ SAKLTKEAVT VQQCYMELSK LVKEKLSPID PYFDKLADAM VTWIEAWDEL 240
  241 NPPTKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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