| Protein: | gi|12325367, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 621 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12325367, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
272.0 | [0..1] | [619..563] |
|
Region A: Residues: [1-242] |
1 11 21 31 41 51
| | | | | |
1 MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV 60
61 PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE CAGTSGGDDE EAPSSAQMAL 120
121 LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI 180
181 VRISSTDQIP PCAFPGDVVI QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP 240
241 PE
|
| Detection Method: |  |
| Confidence: | 25.69897 |
| Match: | 2annA |
| Description: | No description for 2annA was found. |
|
Region A: Residues: [243-442] |
1 11 21 31 41 51
| | | | | |
1 YHSMEYHPQW DHPPPNPMPE DVGPFNRPVV EEEVAFRLLC PADKVGSLIG KGGAVVRALQ 60
61 NESGASIKVS DPTHDSEERI IVISARENLE RRHSLAQDGV MRVHNRIVEI GFEPSAAVVA 120
121 RLLVHSPYIG RLLGKGGHLI SEMRRATGAS IRVFAKDQAT KYESQHDEIV QVIGNLKTVQ 180
181 DALFQILCRL REAMFPGRLP
|
| Detection Method: | |
| Confidence: | 22.69897 |
| Match: | 1j4wA |
| Description: | Far upstream binding element, FBP, KH3 and KH4 domains |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.766407798661875 | bayes_pls_golite062009 |
| nucleic acid binding | 0.1608635436815 | bayes_pls_golite062009 |
| RNA binding | 0.0205643208063799 | bayes_pls_golite062009 |
|
Region A: Residues: [443-548] |
1 11 21 31 41 51
| | | | | |
1 FQGMGGPPPP FMGPYPEPPP PFGPRQYPAS PDRYHSPVGP FHERHCHGPG FDRPPGPGFD 60
61 RPPSPMSWTP QPGIDGHPGG MVPPDVNHGF ALRNEPIGSE NPVMTS
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [549-621] |
1 11 21 31 41 51
| | | | | |
1 ANVEIVIPQA YLGHVYGENC SNLNYIKQVS GANVVVHDPK AGTTEGLVVV SGTSDQAHFA 60
61 QSLLHAFILC GQS
|
| Detection Method: | |
| Confidence: | 17.09691 |
| Match: | 1j5kA |
| Description: | HnRNP K, KH3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.766407798661875 | bayes_pls_golite062009 |
| nucleic acid binding | 0.1608635436815 | bayes_pls_golite062009 |
| RNA binding | 0.0205643208063799 | bayes_pls_golite062009 |
