| Protein: | gi|20260608, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20260608, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
187.0 | [0..29] | [395..121] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MMPNSRSATI TPTTESTTTT TTTTTTLTTS YWCYSCTRFI SVWEDQDANA GVLCPYCNGG 60
61 FIEEIEDSSN STVAAIPAST PEVRSVEETH RSIIRR
|
| Detection Method: |  |
| Confidence: | 1.25 |
| Match: | 1zu1A |
| Description: | Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.304205134456748 | bayes_pls_golite062009 |
|
Region A: Residues: [97-206] |
1 11 21 31 41 51
| | | | | |
1 RRSNRRTSFN PVIVLHGGGG GGAGERVENE EGDGATRERR AYEFYYDDGS GSGLRPLPDS 60
61 VSEILMGSGF ERLLEQLSQI EASGNGIGRS GNPPASKSAI ESLPRVEISD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [207-312] |
1 11 21 31 41 51
| | | | | |
1 CHTKAEANCA VCTEVFEAGI EGREMPCKHI FHGDCIVPWL SIRNSCPVCR FELPSDPIQR 60
61 SNEEEHAVGM TIWRLPGGGF AVGRFNAGVR EGERILPVVL TEMDGG
|
| Detection Method: | |
| Confidence: | 16.39794 |
| Match: | 2cklA |
| Description: | No description for 2cklA was found. |
|
Region A: Residues: [313-395] |
1 11 21 31 41 51
| | | | | |
1 GLGSNEGPRR ISWVRAHETP EMSRNGGRSG NGGRLRRAVR GMVSFMRRVR PSRGSSNSNV 60
61 IDLDSDGETR VMNRSTSLIR RFF
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | PF06547.3 |
| Description: | No description for PF06547.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
