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View Structure Prediction Details

Protein: COPT2_ARATH
Organism: Arabidopsis thaliana
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COPT2_ARATH.

Description E-value Query
Range
Subject
Range
COPT6_ARATH - Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1
140.0 [0..1] [150..1]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHDHMHDMP PPSPSSSSMS NHTTPHMMMM HMTFFWGKNT EVLFSGWPGT SSGMYALCLI  60
   61 VIFLLAVIAE WLAHSPILRV SGSTNRAAGL AQTAVYTLKT GLSYLVMLAV MSFNAGVFIV 120
  121 AIAGYGVGFF LFGSTTFKKP SDDQKTAELL PPSSGCVC

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.823909
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle