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View Structure Prediction Details

Protein: gi|30725458, gi|...
Organism: Arabidopsis thaliana
Length: 622 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30725458, gi|....

Description E-value Query
Range
Subject
Range
gi|110738012 - gi|110738012|dbj|BAF00941.1| hypothetical protein [Arabidopsis thaliana]
597.0 [0..13] [621..23]

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Predicted Domain #1
Region A:
Residues: [1-622]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI  60
   61 SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL LLDSSLSSSS FASSSRTELE 120
  121 DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD 180
  181 LRSIAQRMIG AGYSRECVQV YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR 240
  241 WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK 300
  301 LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP 360
  361 SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC RGLKCTNDRN DPDMDISELE 420
  421 GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD 480
  481 KYLRKLTGIF RQAATKYQRA TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF 540
  541 EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN 600
  601 LETAVLDFFE GYTTAPHLRR SQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 114.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle