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View Structure Prediction Details

Protein: MCA5_ARATH
Organism: Arabidopsis thaliana
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCA5_ARATH.

Description E-value Query
Range
Subject
Range
gi|33304380, gi|... - gi|37788551|gb|AAP44517.1| metacaspase 4 precursor [Arabidopsis thaliana], gi|33304380|gb|AAP84710.2...
398.0 [0..1] [410..1]

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Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKAVLIGI NYPGTKAELR GCVNDVRRVH KSLVDRFGFS ERNITELIDT DESSTKPTGK  60
   61 NIRRALLNLV ESAKPGDVLV VHYSGHGTRL PAETGEDDDT GYDECIVPCD MNLITDDEFR 120
  121 DLVEKVPKEA HITIISDSCH SGGLIDEAKE QIGESTKKKP KKESGGSSGL GIKGFVREAV 180
  181 EEALESKGIA IPHHKDEKDE NKTKELKLED GAKVHVVNKS LPLQTLIDIL KQNTGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 2j31A
Description: No description for 2j31A was found.

Predicted Domain #2
Region A:
Residues: [237-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDIEVGKIRP TLFNVFGEDA SPKVKKFMKV ILTKLQEGKT EGGILGMIGK LAQEFLKHKL  60
   61 NDDEEYVKPA MKTHVGNKQE VYAGASNGSL ADNGILISGC QTDQTSADAS PQGHPEMAYG 120
  121 AFTNAVQIIL EETKGMITYK ELVLKARKLL KKQGFSQRPG LYCSDSFVNA PFIC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.28
Match: 1jxqA
Description: Caspase-9
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.446816200197746 bayes_pls_golite062009
binding 0.128865592323915 bayes_pls_golite062009
hydrolase activity 0.00345801703057891 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle