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View Structure Prediction Details

Protein: NAC31_ARATH
Organism: Arabidopsis thaliana
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC31_ARATH.

Description E-value Query
Range
Subject
Range
gi|73759951 - gi|73759951|dbj|BAE20090.1| NAC-domain protein Ze567 [Zinnia elegans]
280.0 [0..12] [318..1]
gi|62546187, gi|... - gi|66394514|gb|AAY46123.1| NAC domain protein NAC3 [Glycine max], gi|62546187|gb|AAX85980.1| NAC3 pr...
271.0 [0..1] [332..1]
gi|28973617, gi|... - gi|9758909|dbj|BAB09485.1| NAM (no apical meristem)-like protein [Arabidopsis thaliana], gi|42567931...
268.0 [0..1] [325..1]
gi|125549156 - gi|125549156|gb|EAY94978.1| hypothetical protein OsI_16785 [Oryza sativa Indica Group]
gi|125591113, gi... - gi|50926750|ref|XP_473322.1| OSJNBb0020O11.1 [Oryza sativa (japonica cultivar-group)], gi|38605889|e...
267.0 [0..22] [307..52]
gi|116310094 - gi|116310094|emb|CAH67114.1| H0502G05.5 [Oryza sativa (indica cultivar-group)]
265.0 [0..22] [331..7]
gi|92888346 - gi|92888346|gb|ABE89364.1| No apical meristem (NAM) protein [Medicago truncatula]
264.0 [0..17] [326..1]

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Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN  60
   61 RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA GYWKATGKDK EVFSGGGGQL 120
  121 VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL 180
  181 IHNQISYLHN HSLSTTHHHH HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS 240
  241 GHNIDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.154902
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [247-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKALINPVVS QLNGIIFPSG NNNNDEDDFD FNLGVKTEQS SNGNEIDVRD YLENPLFQEA  60
   61 SYGLLGFSSS PGPLHMLLDS PCPLGFQL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle