YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CCD71_ARATH
Organism: Arabidopsis thaliana
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCD71_ARATH.

Description E-value Query
Range
Subject
Range
gi|114599953 - gi|114599953|ref|XP_517728.2| PREDICTED: cyclin B1 [Pan troglodytes]
261.0 [0..5] [304..218]

Back

Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLLCEESW PASPLTPEPL PNFRHRSHDN DVVKMYPEID AATMEEAIAM DLEKELCFNN  60
   61 HGDKFVEFFV SKKLTDYRFH AFQWLIQTRS RLNLSYETVF SAANCFDRFV YMTCCDEWTN 120
  121 WMVELVAVTS LSIASKFNEV TTPLLEELEM EGLTHMFHVN TVAQMELIIL KALEWRVNAV 180
  181 TSYTFSQTLV SKIGMVGDHM IMNRITNHLL DVICDLKMLQ YPPSVVATAA IWILMEDKVC 240
  241 RESIMNLFEQ NHKEKIVKCV DGMKNRDIDH QSSRRRYSEG RSILSLLQRG DVMNMNGDYN 300
  301 VEDLSKIFQI FRYEKKKRDR GNHQDNIRPA KRMTIEMSNY I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.39794
Match: 2b9rA
Description: No description for 2b9rA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle