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View Structure Prediction Details

Protein: gi|12324203, gi|...
Organism: Arabidopsis thaliana
Length: 1030 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|12324203, gi|....

Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKEETLKN LGDGVVLRPV DHCSSIWSMK MNMKNFLKKL HISPNQSDEA EGSISTTKSN  60
   61 HHKSIDVSSS SSPRSHHSNS PEIKPFSGLS NWLSSVGHRK IPSPPNSFNA KNRAATVDDT 120
  121 VVVNGSEHVD LGSKDPAVEE ENQIQLALEL SAREDPEATQ IEAIKQFS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [169-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGSCAPENSP AELIAYRYWN YNCLGYDDKI LDGFYDLYGV LNASSAERIP PLLDLQGTPV  60
   61 SDGVTWEAVL VNRSGDSNLL RLEQMALDIA AKSRSVSSSG FVNSELVRKL AILVGDYMGG 120
  121 PVVHPESMLR AWRSLSYSLK ATLGSMVLPL GSLTIGLARH RALLFKVLCD SVGVPCRIVK 180
  181 G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.522879
Match: 3ckhA
Description: No description for 3ckhA was found.

Predicted Domain #3
Region A:
Residues: [350-546]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQYTGSEDVA MNFIKADDGR EYIVDLMGDP GTLIPADAAG LQIDYDESAY SASPGDNDSI  60
   61 HVASSSNGIE SSYEENTEFR TGEHRSSTKS SGERNQSGGG GDLIVHPNIS REDVKNQKKV 120
  121 EKAPFQNLSS RPIHSFTHMR SPSWTEGVSS PAAQRMKVKD VSQYMIDAAK ENPRLAQKLH 180
  181 DVLLESGVVA PPNLFSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.154902
Match: 2dtgE
Description: No description for 2dtgE was found.

Predicted Domain #4
Region A:
Residues: [547-1030]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VYPQQLEATV ESKNSTEAKK ERGKDLETTQ EGRHQNGFGP VRFLPPLPRV QSKTNAHDQR  60
   61 DNGKVVSQSD SSHSEASSTE YARTVPAAVA AAAVVASSMV AAAAAKSANS DSSPIELPAA 120
  121 AAATATAAAV VATAAAVSRQ LELGSNSDGD DGSGGHEPQG SGDSNHGPNS GGERISDKSI 180
  181 GNESSKSDCD DVSDCEILWE EITVGERIGL GSYGEVYRGD WHGTEVAVKK FLDQDLTGEA 240
  241 LEEFRSEVRI MKKLRHPNIV LFMGAVTRPP NLSIVTEFLP RGSLYRLIHR PNNQLDERRR 300
  301 LRMALDAARG MNYLHSCNPM IVHRDLKSPN LLVDKNWVVK VCDFGLSRMK HSTYLSSKST 360
  361 AGTAEWMAPE VLRNEPADEK CDVYSYGVIL WELFTLQQPW GKMNPMQVVG AVGFQHRRLD 420
  421 IPDFVDPAIA DLISKCWQTD SKLRPSFAEI MASLKRLQKP VTGSNIPRPV PSSSSLPTEH 480
  481 EQKD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.39794
Match: 2ptkA
Description: CHICKEN SRC TYROSINE KINASE
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle