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View Structure Prediction Details

Protein: ATL39_ARATH
Organism: Arabidopsis thaliana
Length: 132 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL39_ARATH.

Description E-value Query
Range
Subject
Range
gi|87240525 - gi|87240525|gb|ABD32383.1| Zinc finger, RING-type [Medicago truncatula]
121.0 [0..7] [132..42]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYFKRNEGT IVFAFASIGF IAFYIINYYI RRCRNRAAAA GDIEEARMSP RRPPRGLDAE  60
   61 AIKSFPSFVY TEARGIEPGI GELECVVCLN EFKDDETLRL VPPCVHVFHA DCVDIWLSHS 120
  121 STCPICRAKV VP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 1iymA
Description: EL5 RING-H2 domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0938889867773109 bayes_pls_golite062009

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