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View Structure Prediction Details

Protein: gi|13877949, gi|...
Organism: Arabidopsis thaliana
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13877949, gi|....

Description E-value Query
Range
Subject
Range
gi|74007803 - gi|74007803|ref|XP_860306.1| PREDICTED: similar to ATPase, Cu++ transporting, alpha polypeptide isof...
129.0 [0..1] [131..193]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA  60
   61 ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG VTWYKVELES KKVVVKGNIL 120
  121 PVDVLESICK VKNAQLWSSP 

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Detection Method: PSI-BLAST
Confidence: 19.045757
Match: 1p6tA
Description: Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.246147507070597 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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