YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CXE12_ARATH
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CXE12_ARATH.

Description E-value Query
Range
Subject
Range
gi|110742006 - gi|110742006|dbj|BAE98942.1| hypothetical protein [Arabidopsis thaliana]
243.0 [0..1] [324..1]

Back

Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSEIAVDCS PLLKIYKSGR IERLMGEATV PPSSEPQNGV VSKDVVYSAD NNLSVRIYLP  60
   61 EKAAAETDSK LPLLVYFHGG GFIIETAFSP TYHTFLTTSV SASNCVAVSV DYRRAPEHPI 120
  121 SVPFDDSWTA LKWVFTHITG SGQEDWLNKH ADFSRVFLSG DSAGANIVHH MAMRAAKEKL 180
  181 SPGLNDTGIS GIILLHPYFW SKTPIDEKDT KDETLRMKIE AFWMMASPNS KDGTDDPLLN 240
  241 VVQSESVDLS GLGCGKVLVM VAEKDALVRQ GWGYAAKLEK SGWKGEVEVV ESEGEDHVFH 300
  301 LLKPECDNAI EVMHKFSGFI KGGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.0
Match: 2c7bA
Description: The Crystal Structure of EstE1, a New Thermophilic and Thermostable Carboxylesterase Cloned from a Metagenomic Library
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle