| Protein: | PHB2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 286 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHB2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
235.0 | [0..10] | [275..1] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP 60
61 EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG LRVLTRPMGD RLPQIYRTLG 120
121 ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT 180
181 TLTFGKEFTA AIEAKQVAAQ EAERAKFIVE KAEQDRRS
|
| Detection Method: |  |
| Confidence: | 14.0 |
| Match: | 1winA |
| Description: | Solution Structure of the Band 7 Domain of the mouse Flotillin 2 Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.10215477176861 | bayes_pls_golite062009 |
| protein binding | 0.769979871341236 | bayes_pls_golite062009 |
| structural molecule activity | 0.591437172549816 | bayes_pls_golite062009 |
|
Region A: Residues: [219-286] |
1 11 21 31 41 51
| | | | | |
1 AVIRAQGEAK SAQLIGQAIA NNQAFITLRK IEAAREIAQT IAQSANKVYL SSNDLLLNLQ 60
61 EMNLEPKK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.606 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.588 | N/A | N/A | d.68.3 | SirA-like |
| View | Download | 0.581 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.573 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.539 | N/A | N/A | d.74.2 | C-terminal domain of arginine repressor |
