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View Structure Prediction Details

Protein: APRL4_ARATH
Organism: Arabidopsis thaliana
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APRL4_ARATH.

Description E-value Query
Range
Subject
Range
APRL3_ORYSJ - 5'-adenylylsulfate reductase-like 3 OS=Oryza sativa subsp. japonica GN=APRL3 PE=2 SV=1
221.0 [0..7] [310..5]

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Predicted Domain #1
Region A:
Residues: [1-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKEILLLLL VIMFLTVADV DAVRVPFCAT KSAKDSIFGL RDQTCSVSGV ESDERPRFVA  60
   61 VTEGDERWLQ IALDMIHKNK CDYVALLFYA SWCPFSRSFR PSFDVISSLY SSIPHFAIKE 120
  121 SSIKPSTLSK YGVHGFPTLL LLNSTMRARY RGTRMLDSLV AFYSDVTGIE TLDKTSLERS 180
  181 VSVPHLGNEN NTEPENCPFT WARSPENMLR QETYLALAIV FVLLRLLHLI YPTLVVFMKF 240
  241 TWRRIAQNMR LESLLEHTVG FLSRAVQLCM HRRSNLQGGA MNARAWASKS LATVSIGDSS 300
  301 SSNRRSSSSQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.221849
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle