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View Structure Prediction Details

Protein: Y1725_ARATH
Organism: Arabidopsis thaliana
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1725_ARATH.

Description E-value Query
Range
Subject
Range
gi|53857147 - gi|53857147|gb|AAP03880.2| Avr9/Cf-9 induced kinase 1 [Nicotiana tabacum]
325.0 [0..23] [446..14]

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Predicted Domain #1
Region A:
Residues: [1-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSWKNICL PISCINNTNQ KKTTTTNPPK EKLLLLSRQT SVPSRVYMSD FSNSTISLND  60
   61 FSNSFFINIH IFTYEELKTI TQGFSKYNFL GEGGFGEVYK GFVDDSLKTG LKDQPVAVKA 120
  121 LKREGGQGHR EWLAEVIILG QLKHPHLVNL VGYCCEDDER LLVYEYMERG NLEDHLFQKY 180
  181 GGALPWLTRV KILLGAAKGL EFLHKQEKPV IYRDFKPSNI LLSSDFSSKL SDFGLATDGS 240
  241 EEEDSNFTKS VMGTEGYAAP EYISAGNLTT MSDVFSFGVV LLEMLTARKA VEKYRAQRGR 300
  301 NLVEWARPML KDPNKLERII DPSLEGKYSV EGIRKAAALA YQCLSHNPKS RPTMTTVVKT 360
  361 LEPILDLKDI QNGPFVYIVP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.09691
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #2
Region A:
Residues: [381-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAGVSEVHEI KCKDDVKVVK EETEKDAKVF PRHRAGRRNR RKHKAMRSRA VYSDTALYKS  60
   61 LGTSLYNPAN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle