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View Structure Prediction Details

Protein: gi|12597814, gi|...
Organism: Arabidopsis thaliana
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12597814, gi|....

Description E-value Query
Range
Subject
Range
gi|110740324 - gi|110740324|dbj|BAF02057.1| hypothetical protein [Arabidopsis thaliana]
564.0 [0..1] [393..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALDGDETVA GGDSQPPVTT AAATTEEKAI ARLSPFPNME HISDNYGDLE LEYSSAMLSS  60
   61 LEKYLPPEML TATREEKAKF MSDILRKYIS RDECSKAKWC KNYWQKIKSN YQPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRELYNFDPE LFLLPSFRKA ISENTKESFR RIISEPFPGV LVFQMFQPDF IQKLIVEVEN  60
   61 IGKWVHETNF PIRRPYHMSK YGVAFVDFGL DIMLQQLMEE FLFPICKGKA YFLLRKTFIV 120
  121 FFPEECGAMF DSHHGYYIEN GEDRDPPLGY HLDDSEITLN VCVRKQFEGG EISFIGTRCL 180
  181 RHKRTDVKPE EVFHYCHSPG QAILHRGRHR HGPRANTPSC SRANMILCCR NSLFREMEKY 240
  241 EKDFPEWCNE CAHEKKEKES QSLDAKRKGM IRIATGGKA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.45
Match: 2hbtA
Description: No description for 2hbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle