| Protein: | gi|10801371, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 404 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10801371, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
369.0 | [0..8] | [400..707] |
|
|
356.0 | [0..1] | [404..99] |
|
|
339.0 | [0..8] | [400..112] |
|
|
336.0 | [0..8] | [400..95] |
|
|
329.0 | [0..8] | [400..383] |
|
|
323.0 | [0..5] | [400..228] |
|
|
321.0 | [0..8] | [400..414] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MGGRGGGSTD YDDKVGRKRK KEKERSSSGS GKEKRHKFPN RGERKSEEID EMWKSIAHNP 60
61 ENDEEGVRTM DDDNFIDDTG LDPSERYGGD AGDRSPTHYP QAEEGEDEDE VNNLFKMGKK 120
121 KKKTERNPAE IALLVENVMA ELEVTAEEDA ELNRQGKPAI NK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [163-272] |
1 11 21 31 41 51
| | | | | |
1 LKKLSLLTDV LGKKQLQTEF LDHGVLTLLK NWLEPLPDGS LPNINIRAAI LRVLTDFPID 60
61 LDQYDRREQL KKSGLGKVIM FLSKSDEETN SNRRLAKDLV DKWSRPIFNK
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 1eo0A |
| Description: | Transcription elongation factor TFIIS N-domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [273-404] |
1 11 21 31 41 51
| | | | | |
1 STRFEDMRNL DEDRVPYRRP PVKKPSNKAT MESRDGDFDL EIRERKTGLT SGQSSRGDRQ 60
61 MTMRPEATPL DFLIRPQSKI DPDEIIARAK QVSQDQRRVK MNKKLQQLKG TKKKRLQATK 120
121 VSVEGRGMIK YL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.309 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.223 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.223 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.211 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
