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View Structure Prediction Details

Protein: gi|30684150, gi|...
Organism: Arabidopsis thaliana
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30684150, gi|....

Description E-value Query
Range
Subject
Range
gi|24762191, gi|... - gi|51971567|dbj|BAD44448.1| unknown protein [Arabidopsis thaliana], gi|51968718|dbj|BAD43051.1| unkn...
212.0 [0..1] [305..1]

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Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVANDLSSK ILPRVLIVSR RTLRKNKYVD FVGEYHLDLI VSSGAVPVIV PRVNGIHSML  60
   61 QSFEPIHGVL LCEGEDVDPS LYADDELSDL SPEDMEEIKK AHAEDMTIDR EKDSIELTLA 120
  121 RLCLERNIPF LGICRGSQIL NVAAGGTLYQ DIDKELGTTM TTTNHIDYDN YDGHRHEARI 180
  181 VEETPLHKLF EEMEIMVNSY HHQGVKRLAQ RFVPMAYAPD GLIEGFYDPN RYDPKEGQFL 240
  241 MGLQFHPERM RLPGSDEFDY PGCALVYQEF VKAVIAFQKK QVNATQVEMK RKTTTLVKSF 300
  301 SQAEFLEVRD SFVLHTYRLY VLPLNIGFSD MAE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.221849
Match: 1gpmA
Description: GMP synthetase; GMP synthetase, central domain; GMP synthetase C-terminal dimerisation domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity 1.86890906127173 bayes_pls_golite062009
catalytic activity 1.30391542469987 bayes_pls_golite062009
anthranilate synthase activity 1.21184543688778 bayes_pls_golite062009
oxo-acid-lyase activity 0.0620506742330145 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle