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View Structure Prediction Details

Protein: PUP17_ARATH
Organism: Arabidopsis thaliana
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUP17_ARATH.

Description E-value Query
Range
Subject
Range
gi|91805981, gi|... - gi|91805981|gb|ABE65719.1| purine permease-like [Arabidopsis thaliana], gi|145325465|ref|NP_00107773...
190.0 [0..1] [398..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMSKASKQT TRHEESEHVQ NPEPDQILSP RRSLELKQRK WWISVSLCLF LVLLGDSLVM  60
   61 LLLNFFYVQM KQDRREEYDQ DLQYKGTWTQ ALIQNAAFPI LIPLFFIFPK PK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QHLETNNTSF LSLRLFFLYL SLGVLVAAHS KLFALGKLVS NYGIFSLIST TQLIFTAVLT  60
   61 AIINRFKFTR WIIISILLTI VIYVLGTPDF GGQPHDGE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.94
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [211-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFGYNIQAWL AFSATIAFSL SLCLIQLGFE KLQVKTKRYG NEKVFRMVLE MQICVAFVAS  60
   61 VVCLVGLFAS DEYKELKGDS KRFKKGETYY VLSLVGLALS WQVWAVGMIG LVHYVSGLFG 120
  121 DVVHMCASPF VALFVVLAFD FMDDVFSWPR IGALIGTVLA LGSYFYTLHK RNKKKMAELN 180
  181 QSENNVEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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