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View Structure Prediction Details

Protein: QWRF3_ARATH
Organism: Arabidopsis thaliana
Length: 482 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QWRF3_ARATH.

Description E-value Query
Range
Subject
Range
gi|52354257 - gi|52354257|gb|AAU44449.1| hypothetical protein AT2G20815 [Arabidopsis thaliana]
427.0 [0..1] [482..1]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSCEHELLK TRRGKSREVS SRFLSSPSAS SSPNRRNSTS NSSRDDQNNN GVKGHLGLKK  60
   61 HDRMSDGTRV CFGLPNQSSI EVDTKENR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSPWINDED NVILPGRFSV DECALYRASS RRNSCSLLYE SFNDETDSEL SDVSCASSLS  60
   61 TNRSSWNHKP GIKVSSKYLH DLTAKPSKGN NKTKLRSQDD SQRTNSSKGI ENRLQRNNSV 120
  121 SRYGSSMSQW ALSPGRSLDT QAVTVPSSKL KPPRGKGVGK LINLGFDFFR SKNKSSPFTS 180
  181 PLKPK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [274-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCDTESAHQL KLMNNRLLQW RFVNARACDV NKNVASQEKN QLLCAWDTLI KLNNLVLQER  60
   61 IKLQKKNLEM KLNYVFLSQV KHLEAWEDME IQHLSSLSII RDSLHSVLSR LPLKEGAKVN 120
  121 LESAVSIIKN AEAVTDAIIS TVDDYAPTME GIVPLASQLA EVVVQEKLML EKCHDLLRMI 180
  181 SELEMQERSL KCCFLIQHKQ TFDTNLLKH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle