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View Structure Prediction Details

Protein: GTE3_ARATH
Organism: Arabidopsis thaliana
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GTE3_ARATH.

Description E-value Query
Range
Subject
Range
gi|110736040 - gi|110736040|dbj|BAE99992.1| hypothetical protein [Arabidopsis thaliana]
288.0 [0..1] [461..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV  60
   61 RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNKKLKTANG GKKGGVHGAA ADKGTVQILK SCNNLLTKLM KHKSGWIFNT PVDVVTLGLH  60
   61 DYHNIIKEPM DLGTVKTRLS KSLYKSPLEF AEDVRLTFNN AMLYNPVGHD VYHMAEILLN 120
  121 LFEEKWVPLE TQYELLIRKQ QPVRDIDFHA PVSTNTHNVE ALPLPAPTPS LSPPPPPKVV 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.69897
Match: 2i8nA
Description: No description for 2i8nA was found.

Predicted Domain #3
Region A:
Residues: [272-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENRTLERAES MTNPVKPAVL PVVPEKLVEE ASANRDLTFD EKRQLSEDLQ DLPYDKLEAV  60
   61 VQIIKKRTPE LSQQDDEIEL DIDSLDLETL WELFRFVTEY KESLSKKKEE QGLDSERDAE 120
  121 SFHNSVHESN TLVTGLESSK VTELGHVAST VRQEVNVGGS SSSNSSSSGS GSGSSGSDSD 180
  181 SSGHESDTGN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle