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View Structure Prediction Details

Protein: MIF1_ARATH
Organism: Arabidopsis thaliana
Length: 102 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIF1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553465 - gi|21553465|gb|AAM62558.1| unknown [Arabidopsis thaliana]
135.0 [0..2] [102..1]
ZHD2_ORYSJ - Zinc-finger homeodomain protein 2 OS=Oryza sativa subsp. japonica GN=ZHD2 PE=2 SV=1
ZHD2_ORYSI - Zinc-finger homeodomain protein 2 OS=Oryza sativa subsp. indica GN=ZHD2 PE=3 SV=1
121.0 [0..38] [102..62]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKKRQMVIK QRSRNSNTSS SWTTTSSSSS SSEISNVRYV ECQKNHAANI GGYAVDGCRE  60
   61 FMAAGVEGTV DALRCAACGC HRNFHRKEVD TEVVCEYSPP NA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.657577
Match: PF04770.3
Description: No description for PF04770.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle