| Protein: | gi|5596480, gi|7... |
| Organism: | Arabidopsis thaliana |
| Length: | 495 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5596480, gi|7....
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..76] | [492..69] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MNLLERRQLC DSCEGSDSCE IDGHVGKETT PKLFNRARIL GSVLNGLLPC TIILLTIDAN 60
61 FGPMIANLRR ARFRVILVKS IRSRAFKLEP DSRNPYPPWD FEGLEHNFYE MFATISQLIP 120
121 FEFSLYMIHQ HAVESIFLND ADDDEWVMII ITHYHLDLDK TEMIECKAVA AIRDLICPRL 180
181 GIIRSSSEGA VEIHIMVLLV EAAWFLESLT EKV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [214-376] |
1 11 21 31 41 51
| | | | | |
1 LAVKGRAPPQ HQVFVSFRGS DVRYNFFSFL KDALIKNGIN VVTDEDAPRG KPIDENLLKL 60
61 IKDSRIAVVI FSENYPESTW CLDELVEIEK QMDLKMLDSC PIFFEVETCH VKLQVARSTF 120
121 NYNLLQLEHD ERKKARQISK KAWEDAEKRF EGWRKALISV ASR
|
| Detection Method: | |
| Confidence: | 26.045757 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.261666574457319 | bayes_pls_golite062009 |
|
Region A: Residues: [377-495] |
1 11 21 31 41 51
| | | | | |
1 LGLTYKKGSN QATFVNEIVE KVKAMLDNVS SSHITPQHQV YISFRSREIR NKFSSLLRAA 60
61 LRRSGINVLL DDENITRIES RDEVDRLFCR VSRVKDRTSV HYQNLQELDV VLEETAGDE
|
| Detection Method: | |
| Confidence: | 3.5 |
| Match: | 2j67A |
| Description: | No description for 2j67A was found. |
