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View Structure Prediction Details

Protein: TTHL_ARATH
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TTHL_ARATH.

Description E-value Query
Range
Subject
Range
gi|79331287, gi|... - gi|79331287|ref|NP_001032094.1| TTL (Transthyretin-Like protein); steroid binding [Arabidopsis thali...
343.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMEIGEDEW KVCCGSSEFA KQMSTSGPLT SQEAIYTARD IWFNQVNVTD WLEAFSAHPQ  60
   61 IGNTPSPSIN SDFARRSVSE QSTAFATTSA SALQELAEWN VLYKKKFGFI FIICASGRTH 120
  121 AEMLHALKER YENRPIVELE IAAMEQMKIT ELRMAKLFSD K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.154902
Match: 2q37A
Description: No description for 2q37A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.334765053110546 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [162-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKVISETDSS SSPVSTKPQD RLRIIGGHLN VAAEAKAPKR SRPPITTHVL DVSRGAPAAG  60
   61 VEVHLEVWSG TTGPSFVHGG GGVWSSVGTS ATDRDGRSGP LMDLVDALNP GTYRISFDTA 120
  121 KYSPGCFFPY VSIVFQVTES QKWEHFHVPL LLAPFSFSTY RGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 2h1xA
Description: No description for 2h1xA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle