| Protein: | gi|110738709, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 407 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110738709, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
361.0 | [0..1] | [406..1] |
|
|
250.0 | [0..77] | [400..290] |
|
|
248.0 | [0..41] | [400..219] |
|
|
241.0 | [0..88] | [399..112] |
|
|
241.0 | [0..86] | [398..15] |
|
|
234.0 | [0..77] | [399..30] |
|
|
234.0 | [0..86] | [398..80] |
|
|
233.0 | [0..123] | [398..119] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MDRHDIEKRF TVVIDNRRLN QSGSSSLFTA FAISFVTLIV VTTFTLISNF SMQPHRDFSG 60
61 VKIEIKRVIP HLPLSSEREG ERSDLLKQQT QVNEKLQVIE VFSGDNLSDK FQKRVNEFVG 120
121 DGCEVNFVMT WISPADFFGN REVLAIESVF KSHPY
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.726 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.692 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.692 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.669 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.609 | d.68.3 | SirA-like |
| View | Download | 0.609 | d.68.3 | SirA-like |
| View | Download | 0.602 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.597 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.387 | c.23.1 | CheY-like |
| View | Download | 0.368 | c.98.2 | HPr kinase/phoshatase HprK N-terminal domain |
| View | Download | 0.348 | d.58.14 | Ribosomal protein S6 |
| View | Download | 0.315 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.294 | c.98.2 | HPr kinase/phoshatase HprK N-terminal domain |
|
Region A: Residues: [156-261] |
1 11 21 31 41 51
| | | | | |
1 GCLMILSATM DSPQGYATLK PFIDRGYKVL AVTPDLPFLL KGTAGELWLD EIKSGKRDPG 60
61 KISLAQNLSN LMRLAYLYKY GGVYLDTDMI VLKSFKGLRN VIGAQT
|
| Detection Method: | |
| Confidence: | 38.366532 |
| Match: | PF04488.6 |
| Description: | No description for PF04488.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.547 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.511 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.511 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.503 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.474 | N/A | N/A | a.188.1 | Description not found. |
| View | Download | 0.473 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.439 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.423 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.355 | N/A | N/A | b.55.1 | PH domain-like |
|
Region A: Residues: [262-407] |
1 11 21 31 41 51
| | | | | |
1 LDPSSTNWTR LNNAVLIFDK NHPLLLKFME EFAKTFNGNI WGYNGPYLVS RVARAVEGSS 60
61 GYNFTVMRPS VFYSVNWLEI KKLFKVPKTE KDSKWVKTKL LHMQRNGYGL HLWNKFSRKY 120
121 EIEQGSAMWK LVSEHCIICE ISSVSS
|
| Detection Method: | |
| Confidence: | 55.200659 |
| Match: | PF04572.3 |
| Description: | No description for PF04572.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.792 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.792 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.577 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.467 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.467 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.445 | N/A | N/A | d.169.1 | C-type lectin-like |
| View | Download | 0.439 | N/A | N/A | d.169.1 | C-type lectin-like |
| View | Download | 0.439 | N/A | N/A | d.169.1 | C-type lectin-like |
| View | Download | 0.403 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.403 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
