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View Structure Prediction Details

Protein: gi|12597771, gi|...
Organism: Arabidopsis thaliana
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12597771, gi|....

Description E-value Query
Range
Subject
Range
gi|58201458 - gi|58201458|gb|AAW66850.1| SAMT [Nicotiana tabacum]
496.0 [0..1] [352..1]

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Predicted Domain #1
Region A:
Residues: [1-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPTPEWVMV GGEGPESYKQ HSSYQRDLLK AAKDKINAVI STNLSLNLIS NRFSVADFGC  60
   61 ASGPNTFVAV QNIIDAVEEK YLRETGQNPD DNIEFQVLFN DLSNNDFNTL FQGLPSGRRY 120
  121 YSAAIPGSFF DRVLPKHSIH IGVMNYAFQF TSKIPKGISD RNSPLWNRDM HCTGFNNKVK 180
  181 KAYLDQFSLD SKNILDARAE ELVPEGLMLL LGSCLRDGIK MSETYRGIVL DLIGASLNDL 240
  241 AQQGVIEKDK VESFNITLYI AEEGELRQII EENGKFTIEA FEDIIQPNGE SLDPKILAVS 300
  301 LKSAFGGILS AHFGAEAMMK AFELVEAKAH QEFSRLQNAK PTMQYLIVLR KN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 128.0
Match: 1m6eX
Description: CRYSTAL STRUCTURE OF SALICYLIC ACID CARBOXYL METHYLTRANSFERASE (SAMT)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle