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View Structure Prediction Details

Protein: gi|25511694, gi|...
Organism: Arabidopsis thaliana
Length: 1678 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|25511694, gi|....

Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKKNSHAL FDLNSPPPSE KIPRLGHITA SQSQLTQLNG SNSNGSMPIR SAFNTVFRDI  60
   61 TNLPLSFDVN NQPSSSTQPF DSATSIQYSH GSVERSGLNS IGRENFHRHK TASTRPFSDL 120
  121 TKPNLQPSPQ NLYATMTPAT AYTLNTGQDL SNPYSCISNQ TQTPVMSTEY SHVRNLQAEF 180
  181 EKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STSATNPRAE AKINSDTSSD DENMANMMFD GAVYESDTDV DQNYSLSSTD DESEDPTTMQ  60
   61 TKSESMANVS THEVEDIVSQ LSENDIELDT FSSQIDRFMI PTESTQTANV PESAPKKR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [302-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRPRLAVTKR MRMKEIRQQN KPGYLDHGDP TYKCKYCGAM MWYDERIRKK ETNKESVFTL  60
   61 CCGEGSVKLP FLKESPHLLK NLLSGNHPLS KHYRDNARIF NMVFAMTSFG GKVDKSMPKG 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [422-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGPAMFRLQG GNYHLIGSLK LTPGDYAKYS QLYIIDTENE VENRATVINK GKNAKPASGK  60
   61 PNLDKNLIEA IIKMLNRCNP YVRRFRTARE RIQTNDEEPF HMRIIADRQG VEGRTYSMPT 120
  121 TSEVAALIPG DFRHGMPDRD IVIGKKSNGH LKRINQIHIS YLALQYPLIF CYGEDGFRPG 180
  181 IEKCSKSKSK KKN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [615-751]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKCISMRQWF AFRIQEREVE CQTLLRSKRL FQQCLCDAYT TIESNRLNYI KFNQSKLRCE  60
   61 NYTSVKEAAA AGATTMEEEG NQLLIPASFT GGPRYMVQSY YDAMAICKHY GFPDLFITFT 120
  121 CNPKWPEITR YYDKRGL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [752-844]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPEDRPNIIA RIFKIKLDSL MNDLTVKKML GKTVASMYTV EFQKRGLPHA HILLFMHAKS  60
   61 KLPTADDIDK LISAEIPDKE KEPDLYEVIK NSM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [845-987]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IHGPCGSANV NSPCMVDGEC SKLYPKKHQD ITKIGSDGYP IYRRRKTDDY VEKGGIKCDN  60
   61 RYVVPYNKKL SLRYNAHINV EWCNQNGSIK YLFKYINKGP DKVVFIVEPT QQTTAGDSET 120
  121 PQQEQGSAEK KKNEIKDWFD CRY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [988-1678]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSASEAVWRI FKYPIQHIST PVQKLSFHVE GKQPAYFDPK SNIEDVLERV ANVDSQFMAW  60
   61 LTLNRRNAVG KNGKRARECL YAEIPAYFTW DGENKSFKKR TRGFSIGRIH YVSRKMEDEY 120
  121 FLRVLLNIVR GPTSYAEIKT YDGVVYKTFK EACFARGILD DDQVFIDGLV EATHVRSQTW 180
  181 HLLAEDILKT KRDEFKNPDL TLTETEIKNY TLQEIEKIML SNGATLEDID EFPKPTRDEW 240
  241 KQMLTPEQRG VYNAITEAVF NNLGGVFFVY GFGGTGKTFI WKTLSAAIRC RGQIVLNVAS 300
  301 SGIASLLLEG GRTAHSRFGI PLNHDEFSVS LDKSFSDIIK NTNNKVFGGK VVVFGGDFRQ 360
  361 VLPVINGAGR AEIVMSSLNA SYLWDHCKVL KLTKNMRLLA NNLSATEAKE IQEFSDWLLA 420
  421 VSDGRINEPN DGVATIDIPE DLLITNADKP IETITNEIYG DPKILHEITD PKFFQGRAIL 480
  481 APKNEDVNTI NEYLLEQLDA EERIYLSADS IDPTDSDSLN NPVITPDFLN SIKLPGLPNH 540
  541 SLCLKVGAPV MLLRNLDPKG GLCNGTRLQI TQLCTQIVEA KVITGDRIGN IVLIPTVNLT 600
  601 PTDTKLPFKM RRRQFPLSVA FAMTINKSQG QSLEHIGLYL PKPVFSHGQL YVALSRVTSK 660
  661 KGLKILILDK DGKLQKQTTN VVFKEVFQNI D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.69897
Match: 3e1sA
Description: No description for 3e1sA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle