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View Structure Prediction Details

Protein: gi|15237906, gi|...
Organism: Arabidopsis thaliana
Length: 298 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237906, gi|....

Description E-value Query
Range
Subject
Range
gi|50762389 - gi|50762389|ref|XP_425038.1| PREDICTED: similar to cathepsin L precursor [Gallus gallus]
280.0 [0..2] [288..82]

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Predicted Domain #1
Region A:
Residues: [1-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKEDGGGDV GAGGIGGIGA GGGKGKGKNV PNELKAEAEA RRKAEAEARQ KAQQDLPQVD  60
   61 EHPLGVFGDG SYLIKDWRQS HRALLSKIIE QIHAICWALV LGKILEFTYN MNRPIAQHMF 120
  121 LDIDSFAEKV KLKADEINAQ KKVITEDMAV GSMKKAFDHV FLKGIEKADG RKKGGGDKVF 180
  181 TIKGRFNEVQ NATAIDIANK VDIGPVGITI DMSVGLRKLK DGIYMVPKPK DGAPKHALTI 240
  241 VAYGMTKEDE LFFVVQNTWG TIWRVNGEGR MIITDTCHMF YLDEVIDDKK KKGKAPIA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.221849
Match: 1cs8A
Description: (Pro)cathepsin L
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.529663942126259 bayes_pls_golite062009
hydrolase activity 0.16837900182603 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle