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View Structure Prediction Details

Protein: GDL56_ARATH
Organism: Arabidopsis thaliana
Length: 320 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL56_ARATH.

Description E-value Query
Range
Subject
Range
gi|42565424 - gi|42565424|ref|NP_189941.2| carboxylic ester hydrolase/ hydrolase, acting on ester bonds / lipase [...
344.0 [0..1] [320..1]

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Predicted Domain #1
Region A:
Residues: [1-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQIIWLTL VLIVVEANAV KQGKNATIPA LIVFGDSIMD TGNNNNLPTL LKCNFPPYGK  60
   61 DYPGGFATGR FSDGRVPSDL IAEKIGLAKT LPAYMNPYLK PEDLLKGVTF ASGGTGYDPL 120
  121 TAKIMSVISV WDQLIYFKEY ISKIKRHFGE EKAKDILEHS FFLVVSSSND LAHTYLAQAH 180
  181 RYDRTSYANF LADSAVHFVR ELHKLGAQKI GVFSAVPVGC VPLQRTVFGD KELDGVILYI 240
  241 NVYDTLFDMI QHPKKYGFEV ADRGCCGKGL LTISYLCNSL NQFTCSNSSA YIFWDSYHPS 300
  301 KRAYQVIVDN LLDKYLSKVY 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.31
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.555413709926701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle