YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPP1_ARATH
Organism: Arabidopsis thaliana
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPP1_ARATH.

Description E-value Query
Range
Subject
Range
SPP2_ARATH - Probable sucrose-phosphatase 2 OS=Arabidopsis thaliana GN=SPP2 PE=2 SV=2
445.0 [0..1] [423..1]

Back

Predicted Domain #1
Region A:
Residues: [1-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLTSPPRL MIVSDLDETM VDHHKDPENL ALLRFNSLWE DAYRHDSLLV FSTGRAQTMY  60
   61 KKLRKEKPLL TPDVIITSVG TEIAYGNSMV PDDNWVEILN KKWDRGIVQE ETSKFPELTL 120
  121 QGETEQRPHK LSFNIDKSKV KAVTKELSPR LEKRGVDVKF IFSGGNAFDV LAKGGGKGQA 180
  181 LAYLLKKLKT EGKLPINTLA CGDSGNDTEL FTIPNVYGVM VSNAQEELLE WYAENAKDNA 240
  241 NIIHASERCA GGITQAIGHF KLGPNLSPR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.39794
Match: 1s2oA
Description: X-Ray structure of the sucrose-phosphatase (SPP) from Synechocystis sp. PCC6803 at 1.40 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.02290994020378 bayes_pls_golite062009
hydrolase activity 0.71914501009647 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [270-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVSDFLECKA DNVNPGHEVV KFFLFYERWR RGEVENCTTY TSSLKASCHP SGVFVHPSGA  60
   61 EKSLRDTIDE LGKYYGDKKG KKFRVWTDQV LATDTTPGTW IVKLDKWEQT GDERKCCTTT 120
  121 VKFTSKEGEG FVWEHVQQIW SEETEIKDDS NWII

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.49
Match: 1tp6A
Description: Structural Genomics, 1.5A crystal structure of a hypothetical protein PA1314 from Pseudomonas aeruginosa
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle