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View Structure Prediction Details

Protein: AZG1_ARATH
Organism: Arabidopsis thaliana
Length: 579 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AZG1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554071 - gi|21554071|gb|AAM63152.1| unknown [Arabidopsis thaliana]
331.0 [0..1] [579..1]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQQQQQQLP STTTRPKPKL LNRLNTYVGS SRVGKRFKLA ERNSTFTTEL RAGTATFLTM  60
   61 AYILAVNASI LSDSGGTCSV SDCIPLCSNP AIEPSQCTGP GLRLIQPDVS CKFNPVNPGY 120
  121 AACVEEIRKD LIVATVAASL IGCVIMGLMA NLPLALAPGM GTNAYFAYTV VGFHGSGSIS 180
  181 YRTALAAVFI EGLIFLFISA IGFRAKLAKL VPKPVRISSS AGIGLFLAFI GLQNNQGIGL 240
  241 VGYSPSTLVT LAACPASSRI SLAPVITSAN GTVSLLAGGS VSGDIMCIHG RMESPTFWLG 300
  301 IVGFVIIAYC LVK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [314-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVKGAMIYGI VFVTAVSWFR NTEVTAFPNT SAGDAAHDYF KKIVDVHVIK HTAGALSFSG  60
   61 INKGHFWEAL VTFLYVDILD TTGTLYSMAR FAGFVDEKGD FA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [416-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQYFAFMSDA SAIVIGSLLG TSPVTVFIES STGIREGGRT GLTAITVAVY FLLAMFFTPL  60
   61 LASIPAWAVG PPLILVGVMM MKSVTEIDWE DMREAIPAFV TMILMPLTYS VAYGLIGGIG 120
  121 SYVVLHLWDW GEEGLVKLGF LKRKVKEEDN NNGVVKASEI DTTV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle