| Protein: | gi|15230734, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 466 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230734, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..5] | [464..37] |
|
|
331.0 | [0..7] | [465..25] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MTSDRFWRGG DRVEVERLVS GATAYFPASV VSAPSVRKKL VWVEHESLTV GGSVSVRMKE 60
61 YVTPTRLRPS PPRELNRRFK ADDEVDVFRD SEGCWVRGNV TTVLEDSRYI VEFKGENRPE 120
121 IEVDQFNLRL HREWLDGGWV PSLLQQSNFS ESTAQRIKLK IKIK
|
| Detection Method: |  |
| Confidence: | 2.23 |
| Match: | 2bkdN |
| Description: | Structure of the N-terminal domain of Fragile X Mental Retardation Protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [165-318] |
1 11 21 31 41 51
| | | | | |
1 RRDQYEKGAL VEVRSEEKAY KGSWYCARIL CLLGDDKYIV EHLKFSRDDG ESIPLRDVVE 60
61 AKDIRPVPPS ELSPVVCYEP GVIVDAWFNK RWWTSRVSKV LGGGSNKYSV FIISTGEETT 120
121 ILNFNLRPHK DWINGQWVIP SKVLTDVPEE CYKP
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 2bkdN |
| Description: | Structure of the N-terminal domain of Fragile X Mental Retardation Protein |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [319-466] |
1 11 21 31 41 51
| | | | | |
1 PLKKLKSCER AEKVFNNGME VEVRSDEPGY EASWFSAKIV SYLGENRYTV EYQTLKTDDE 60
61 RELLKEEARG SDIRPPPPPL IPKGYRYELY ELVDAWYNEG WWSGRVYKIN NNKTRYGVYF 120
121 QTTDESLEFA YNDLRPCQVW RNGKWSRV
|
| Detection Method: | |
| Confidence: | 26.107905 |
| Match: | PF05641.3 |
| Description: | No description for PF05641.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.311 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.266 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.266 | N/A | N/A | f.4.1 | OMPA-like |
| View | Download | 0.220 | N/A | N/A | f.4.1 | OMPA-like |
| View | Download | 0.208 | N/A | N/A | d.107.1 | Ran-binding protein mog1p |
