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View Structure Prediction Details

Protein: gi|25372752, gi|...
Organism: Arabidopsis thaliana
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25372752, gi|....

Description E-value Query
Range
Subject
Range
gi|2098711 - gi|2098711|gb|AAB57670.1| pectinesterase [Citrus sinensis]
130.0 [0..21] [166..57]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNLHLATA VILLLLTASQ SGVAMAQRVM GGGRDPCSVS DFKVLCRSVV KGQKNVNAAT  60
   61 EVSIRELMKR TIKAKEAAKI SRKSGGGLKT CYSNYDSALE NLQKALKNIK QNDGFSLNIN 120
  121 LSASLTDFDT CNDAMGGGTA SNVFAKSTST LHEMADNCLA LSTLVKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle