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View Structure Prediction Details

Protein: PHF1_ARATH
Organism: Arabidopsis thaliana
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHF1_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
458.0 [0..4] [398..1227]

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Predicted Domain #1
Region A:
Residues: [1-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIEEASRES GHVVCGSWIR RPKKVNWVLI AKASKRRGSS VSSPALLNIF SFDPITASLS  60
   61 SSPLATHTLK DSDGDPVAVS VHPGGDYFVC STSKGGCKLF ELVGGATGIT ILAKELLPLQ 120
  121 NAGLQKCMAF SFDGSKLAVG GVDGCLRIME WPNLSVILDE PKAHKSIRDM DFSLDSEFLA 180
  181 TTSTDGSARI WKAEDGFPLS TLERSGDENI ELCRFSKDGT KPFLFCAAQR GDTPMVNVYD 240
  241 ISTWKKLGFK KLSRKTASTM AVSLDGKYIA LGGKDGDVSV AEVKTMEIYH YSKRLHLGQS 300
  301 IASLEFCPSE RVMLTTSSEW GEMVTKLTVP KEWKEWQIYA LLFCLFMASV IAAYVFFENS 360
  361 DSFWKLPMGK DQKRPKISLF GGSSSTPSED HSRWNLDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.09691
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle