| Protein: | gi|7486309, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 733 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7486309, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
385.0 | [0..15] | [728..229] |
|
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353.0 | [0..3] | [726..37] |
|
|
348.0 | [0..4] | [726..2] |
|
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331.0 | [0..2] | [726..4] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MTKSLADSML RYVKRSTPLK PNENPTSVEN DKAEEICEDT DVNMNTIPEC VYSGEKDELL 60
61 EITDPANWKN IDRELRDFLV EKGPMKRVHE KYAFPK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.495 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.402 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.400 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.400 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.365 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.354 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.308 | a.39.1 | EF-hand |
| View | Download | 0.291 | a.28.1 | ACP-like |
| View | Download | 0.290 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
|
Region A: Residues: [97-189] |
1 11 21 31 41 51
| | | | | |
1 TAGIRRHFSH RYYKREMKNG DKQDRNWLLY SKVSDKVYCF CCKLFGRDQD AMQLSSTGFN 60
61 DWRNIRIRLS QHETSHRHIV CMSKWMELEL RLR
|
| Detection Method: | |
| Confidence: | 1.0 |
| Match: | 2uvlA |
| Description: | No description for 2uvlA was found. |
|
Region A: Residues: [190-733] |
1 11 21 31 41 51
| | | | | |
1 KHLTIDKCLQ KDINIEKNHW REVLLRIFSL VKNLAKQNLA FRGENEKIGQ KNNGNFRVLL 60
61 NRSATLIQSY ESISDELKKV QLMIIKKIQE AKYFSVILDC TPDKSHKEQM SLIIRCVDVS 120
121 MASTQVSEFF LTFVEVSDKS GEGLFELLCD TLVALNLNIN DVRGQGYDNG CNMKGKHKGV 180
181 QKKLLDINSR AFYTPCGCHS LNLPSHLKKR LNSLESFSGF TACFHHLQQG LKIRDALDYL 240
241 AENCDDPKAR SDADCLATSE THRIGGFEFL FGMVIWYNLL FTMNTVSKAL QSENIDIELA 300
301 LVQLKGLVSY LQNYRETGFQ EAKAEATLIA ESMDIEPKFP VKRKRIIKRK RHFDEEMEND 360
361 VETELLSEEE NFKVRFEQFE EYGRIFRFLF DLRKLKSASD DGLKAACINL ETSLKHGDSS 420
421 DVDGNHLFLE LKVLKELLPT EITKAIEVLN FLKKFEGCYP NTWIAFRVML TVPVSVASAE 480
481 RSFSKLKLIK SYSRSTMSEE RLNALAILSI ERDLVGELDY ISLMNDFAAK TARRSIFEIR 540
541 DDDE
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| Detection Method: | |
| Confidence: | 30.045757 |
| Match: | 2bw3A |
| Description: | Three-dimensional structure of the Hermes DNA transposase |
Matching Structure (courtesy of the PDB): |
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