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View Structure Prediction Details

Protein: PKS2_ARATH
Organism: Arabidopsis thaliana
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PKS2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21618120 - gi|21618120|gb|AAM67170.1| phytochrome kinase substrate 1, putative [Arabidopsis thaliana]
561.0 [0..1] [442..1]

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Predicted Domain #1
Region A:
Residues: [1-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLTSSSST PNVSFDFMMN NNNNSNNLYG PFSSSSTSFS YLTSKEDALT QKNLMSGITN  60
   61 DVLGINKKAS EDLEISVFGA EKYFNGDMDS DHSPRLVSPL PDPEVPIERI FVGPKQSSKN 120
  121 SSETPSLRSE SSWNSQSLLL QSKYVEKKKN IKKNSSCNSY FQEKDMSSNH KVSNKKSFLA 180
  181 TLGCRCVCSN WSSVDVVDDK RRSSGLKKIK TQLSFSGDLS SEMKIHQQQQ EAMLEQRKSL 240
  241 EIFGSPLIEK RIIQKKFPWE YSSSAKKEEH GFSVKYEEEE DGSVSDVSTD LFEIESLTGK 300
  301 ANPFLARQGS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [311-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDPDSPDGYA PSEVSIQWSV VTASVADFSV MSECATSPVK KNRSFQIPRI PIMAKSNREI  60
   61 APQRRKSSSS GLLMGCKSHK SVRVSGDSYT SMNRTPSYVP RFPVEANPTS TETRRRISSS 120
  121 SVSHTQSPFL YT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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