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View Structure Prediction Details

Protein: gi|11357531, gi|...
Organism: Arabidopsis thaliana
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11357531, gi|....

Description E-value Query
Range
Subject
Range
gi|60657600 - gi|60657600|gb|AAX33321.1| secondary cell wall-related glycosyltransferase family 47 [Populus tremul...
414.0 [0..3] [475..1]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMVEKNSSA IGYVARNLLL SLFVVTTILF ALSCYFVLRS TAHNRFLSST FPSKSFVDVR  60
   61 PEKANCRCVK DEKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVIAGPLKVY MYNMDPEFHF GLLDWKKKEG SDSSVWPDIQ KYIPPYPGGL NLQHSIEYWL  60
   61 TLDLLASEYE NAPRSVAAKR VYNSSEADVI FVPFFSSLSY NRFSKVNPHQ KTSRNKDLQG 120
  121 KLVTFLTAQE EWKRSGGRDH VVLAHHPNSM LDARNKLFPA MFILSDFGRY PPTVANVEKD 180
  181 VIAPYKHVIK AYENDTS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.920819
Match: PF03016.6
Description: No description for PF03016.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [272-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFDSRPILLY FQGAIYRKDG GFVRQELFYL LQDEKDVHFS FGSVRNGGIN KASQGMHNSK  60
   61 FCLNIAGDTP SSNRLFDAIA SHCVPVIISD DIELPFEDVI DYSEFSVFVR TSDALKENFL 120
  121 VNLIRGITKE EWTRMWNRLK EVEKYYEFHF PSKVDDAVQM IWQAIARKVP GVKMRIHKSR 180
  181 RYSGSVSETG KESRWSSLIP RSFW

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.06
Match: 2nzwA
Description: No description for 2nzwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle