| Protein: | gi|20197120, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20197120, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..127] | [531..34] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP 60
61 FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS RSNLDVESKA PLLPERHDDS 120
121 DKASATQSAW SHKGSFAEE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [140-536] |
1 11 21 31 41 51
| | | | | |
1 LPIGGYGCSV IQTIFNAINV MAGVGLLSTP YTVKEAGWAS MVILLLFAVI CCYTATLMKD 60
61 CFENKTGIIT YPDIGEAAFG KYGRILICML LYTELYSYCV EFIILEGDNL TGLFPGTSLD 120
121 LLGFRLDSKH LFGILTALIV LPTVWLKDLR IISYLSAGGV IATALIAVSV FFLGTTGGIG 180
181 FHHTGQAVKW NGIPFAIGIY GFCYSGHSVF PNIYQSMADK TKFNKAVITC FIICVLLYGG 240
241 VAIMGYLMFG EATLSQITLN MPQDQFFSKV AQWTTVVSPF TKYALLMNPL ARSIEELLPE 300
301 RMSENIWCFL LLRTALVASS VCSAFLIPFF GLMMALIGSL LSILVAIIMP ALCFIKIMGN 360
361 KATRTQMILS SIIVAIGVVS GTLGTYSSVA KIIRNYQ
|
| Detection Method: | |
| Confidence: | 2.03 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
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