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View Structure Prediction Details

Protein: gi|15230479, gi|...
Organism: Arabidopsis thaliana
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230479, gi|....

Description E-value Query
Range
Subject
Range
gi|15795164 - gi|15795164|dbj|BAB03152.1| unnamed protein product [Arabidopsis thaliana]
202.0 [0..3] [230..2]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPTIRTVA SYNTHLEYSV DFFGDEFIVT VTWDSSVISR WIRNVLFNNR FSSHPLVVGV  60
   61 GVQWTPFSYY SDPRPNNYYA DPPPIRYYSD NPADILQLCV GNRCLIIQLG YCDQVPNNLR 120
  121 SFLADPETTF VGVWNGQDAG KLARCCHQLE IGELLDIRRY VTDSWGRSMR RSSFEEIVEE 180
  181 CMGYQGVMLD PEISMSDWTA YDLDLDQILQ ASLDAYVCHQ LGVWTRLWEV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.0
Match: 1d9dA
Description: Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle