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View Structure Prediction Details

Protein: SRS2_ARATH
Organism: Arabidopsis thaliana
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRS2_ARATH.

Description E-value Query
Range
Subject
Range
SRS7_ARATH - Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1
360.0 [0..1] [316..1]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGIFSLGGN NNNNGDEEEE NQQQQKTNWV WYRSNANTNN INPSSSQQVW QIPPEQMLMH  60
   61 HHSHPQQQSL DLYPGHQIDV SDLA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSSRSITISC RDCGNQAKKD CTHMRCRTCC KSRGFDCSTH VRSTWIPVAR RRERQQQLHM  60
   61 STSGGGGGSG SGGAGGGGSS IPKRHRDPTL PGTSSSSRLP SHSAGLEMGE ASFPGEVSSD 120
  121 ALFRCVKMSG VDDGGDGQYA YQTTVNIGGH LFKGILYDQG PESSYMSGGS GGSDHQSSSA 180
  181 GGGGGGHPFN PPVVTDGGGG VSSAMFVDPN SGGYYSSNMT TSVFMPPGTQ FYQNPPRS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 117.318759
Match: PF05142.3
Description: No description for PF05142.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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