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View Structure Prediction Details

Protein: FAD4_ARATH
Organism: Arabidopsis thaliana
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAD4_ARATH.

Description E-value Query
Range
Subject
Range
FD4L2_ARATH - Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana GN=FAD4L2 PE=2 SV=1
396.0 [0..1] [309..1]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSLPTKYP LRPITNIPKS HRPSLLRVRV TCSVTTTKPQ PNREKLLVEQ RTVNLPLSND  60
   61 QSLQSTKPRP NREKLVVEQR LASPPLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [88-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDPTLKSTWT HRLWVAAGCT TLFVSLAKSV IGGFDSHLCL EPALAGYAGY ILADLGSGVY  60
   61 HWAIDNYGDE STPVVGTQIE AFQGHHKWPW TITRRQFANN LHALAQVITF TVLPLDLAFN 120
  121 DPVFHGFVCT FAFCILFSQQ FHAWAHGTKS KLPPLVVALQ DMGLLVSRRQ HAEHHRAPYN 180
  181 NNYCIVSGAW NNVLDESKVF EALEMVFYFQ LGVRPRSWSE PNSDWIEETE ISNNQA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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